Examples
Examples for which Simcluster seems to present a better qualitative performance than those traditional methods applied directly from the microarray analysis field. The publicly available datasets were obtained from different sources, listed below.
| Example | Technology | Dataset source |
|---|---|---|
| Simulation | Affymetrix | Innate Immunity Systems Biology |
| Error Addition | MPSS | Ludwig Institute for Cancer Research Transcriptome |
| Digital Northern | EST sequencing | Blastocladiella emersonii EST Database |
| Cancer Transcriptome | SAGE | The Cancer Anatomy Project |
| Differential Expression | SAGE | Gene Expression Omnibus |
| Constitutive Transcriptome | MPSS | Mouse Transcriptome Project |